tmod - Feature Set Enrichment Analysis for Metabolomics and Transcriptomics
Methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis. See Zyla et al (2019) <doi:10.1093/bioinformatics/btz447>.
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5.90 score 4 stars 200 scripts 454 downloads
colorDF - Colorful Data Frames in R Terminal
Colorful Data Frames in the terminal. The new class does change the behaviour of any of the objects, but adds a style definition and a print method. Using ANSI escape codes, it colors the terminal output of data frames. Some column types (such as p-values and identifiers) are automatically recognized.
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5.71 score 17 stars 60 scripts 437 downloadstagcloud - Tag Clouds
Generating Tag and Word Clouds.
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cpp
5.00 score 1 stars 6 dependents 28 scripts 539 downloads
gghotelling - Hotelling's T² Ellipses and Outlier Detection for 'ggplot2'
Calculate Hotelling's T² ellipses and detect multivariate outliers both for base R plots and 'ggplot2' plots. Optionally, uses robust covariance estimation to reduce the influence of outliers on the ellipses. Also included: bagplots, kernel density plots and outlier diagnostic plots.
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4.78 score 3 stars 5 scripts 251 downloadsplotwidgets - Spider Plots, ROC Curves, Pie Charts and More for Use in Other Plots
Small self-contained plots for use in larger plots or to delegate plotting in other functions. Also contains a number of alternative color palettes and HSL color space based tools to modify colors or palettes.
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3.28 score 2 stars 5 dependents 64 scripts 633 downloads